Alain DENISE  Professeur Faculté des Sciences d'Orsay Laboratoire Interdisciplinaire des Sciences du Numérique (LISN) Address : LISN, bâtiment 660 Université Paris-Saclay 91405 Orsay Cedex  France email: alain.denise@lri.fr

Research

• RNA structural bioinformatics
• More generally, algorithmics and combinatorics for biology.

Publications

Software

• CaRNAval: Extracting Recurrent Interaction Networks (RINs) in RNA structures.
• VARNA: Visualisation Applet for RNA.
• GenRGenS: Generation of Random Genomic Sequences and Structures.
• Cartaj: Classification Of RNA threeway Junctions.
• Rna3Dmotif: Extracting (local) RNA tertiary motifs in RNA structures.
• GARN: RNA 3D sampling with game algorithms.
• NestedAlign: Pairwise RNA secondary structure comparison.

Teaching